A software pipeline for processing and identification of fungal ITS sequences
R. Henrik Nilsson, Gunilla Bok, Martin Ryberg, Erik Kristiansson, and Nils Hallenberg
(Source Code in Biology and Medicine 4: 1)

The pipeline, released under the GNU-GPL version 2 licence: download.

January 15, 2009: Initial release.
May 10, 2009: Minor cosmetic bugfix.
February 27, 2010: Minor performance enhancement.

The seed of the BLAST database: download (last updated on March 15, 2012).

Contact information

Henrik Nilsson (henrik dot nilsson at dpes dot gu dot se)
University of Gothenburg
Department of Plant and Environmental Sciences
Box 461
405 30 Gothenburg